Processing information
2022-03-06
More information about this can be found here
| pacakge_name | function_name | parameter | time |
|---|---|---|---|
| massprocesser | process_data | path:~/scratch60 | 2022-02-28 13:05:44 |
| massprocesser | process_data | polarity:negative | 2022-02-28 13:05:44 |
| massprocesser | process_data | ppm:20 | 2022-02-28 13:05:44 |
| massprocesser | process_data | peakwidth:5,30 | 2022-02-28 13:05:44 |
| massprocesser | process_data | snthresh:10 | 2022-02-28 13:05:44 |
| massprocesser | process_data | prefilter:3,500 | 2022-02-28 13:05:44 |
| massprocesser | process_data | fitgauss:FALSE | 2022-02-28 13:05:44 |
| massprocesser | process_data | integrate:2 | 2022-02-28 13:05:44 |
| massprocesser | process_data | mzdiff:0.01 | 2022-02-28 13:05:44 |
| massprocesser | process_data | noise:500 | 2022-02-28 13:05:44 |
| massprocesser | process_data | threads:6 | 2022-02-28 13:05:44 |
| massprocesser | process_data | binSize:0.025 | 2022-02-28 13:05:44 |
| massprocesser | process_data | bw:5 | 2022-02-28 13:05:44 |
| massprocesser | process_data | output_tic:FALSE | 2022-02-28 13:05:44 |
| massprocesser | process_data | output_bpc:FALSE | 2022-02-28 13:05:44 |
| massprocesser | process_data | output_rt_correction_plot:FALSE | 2022-02-28 13:05:44 |
| massprocesser | process_data | min_fraction:0.5 | 2022-02-28 13:05:44 |
| massprocesser | process_data | fill_peaks:FALSE | 2022-02-28 13:05:44 |
| massdataset | create_mass_dataset() | no:no | 2022-02-28 14:07:06 |
| massprocesser | process_data | path:E:/2019_CRC/20190109_CRC_RPLC50mm_neg_XCMS/tidymass | 2022-03-01 09:03:10 |
| massprocesser | process_data | polarity:negative | 2022-03-01 09:03:10 |
| massprocesser | process_data | ppm:20 | 2022-03-01 09:03:10 |
| massprocesser | process_data | peakwidth:5,30 | 2022-03-01 09:03:10 |
| massprocesser | process_data | snthresh:10 | 2022-03-01 09:03:10 |
| massprocesser | process_data | prefilter:3,500 | 2022-03-01 09:03:10 |
| massprocesser | process_data | fitgauss:FALSE | 2022-03-01 09:03:10 |
| massprocesser | process_data | integrate:2 | 2022-03-01 09:03:10 |
| massprocesser | process_data | mzdiff:0.01 | 2022-03-01 09:03:10 |
| massprocesser | process_data | noise:500 | 2022-03-01 09:03:10 |
| massprocesser | process_data | threads:6 | 2022-03-01 09:03:10 |
| massprocesser | process_data | binSize:0.025 | 2022-03-01 09:03:10 |
| massprocesser | process_data | bw:5 | 2022-03-01 09:03:10 |
| massprocesser | process_data | output_tic:FALSE | 2022-03-01 09:03:10 |
| massprocesser | process_data | output_bpc:FALSE | 2022-03-01 09:03:10 |
| massprocesser | process_data | output_rt_correction_plot:FALSE | 2022-03-01 09:03:10 |
| massprocesser | process_data | min_fraction:0.5 | 2022-03-01 09:03:10 |
| massprocesser | process_data | fill_peaks:FALSE | 2022-03-01 09:03:10 |
| massdataset | create_mass_dataset() | no:no | 2022-03-01 09:51:34 |
| massprocesser | process_data | path:~/scratch60/CRC HILIC POS | 2022-03-02 07:55:29 |
| massprocesser | process_data | polarity:positive | 2022-03-02 07:55:29 |
| massprocesser | process_data | ppm:20 | 2022-03-02 07:55:29 |
| massprocesser | process_data | peakwidth:5,30 | 2022-03-02 07:55:29 |
| massprocesser | process_data | snthresh:10 | 2022-03-02 07:55:29 |
| massprocesser | process_data | prefilter:3,500 | 2022-03-02 07:55:29 |
| massprocesser | process_data | fitgauss:FALSE | 2022-03-02 07:55:29 |
| massprocesser | process_data | integrate:2 | 2022-03-02 07:55:29 |
| massprocesser | process_data | mzdiff:0.01 | 2022-03-02 07:55:29 |
| massprocesser | process_data | noise:500 | 2022-03-02 07:55:29 |
| massprocesser | process_data | threads:6 | 2022-03-02 07:55:29 |
| massprocesser | process_data | binSize:0.025 | 2022-03-02 07:55:29 |
| massprocesser | process_data | bw:5 | 2022-03-02 07:55:29 |
| massprocesser | process_data | output_tic:FALSE | 2022-03-02 07:55:29 |
| massprocesser | process_data | output_bpc:FALSE | 2022-03-02 07:55:29 |
| massprocesser | process_data | output_rt_correction_plot:FALSE | 2022-03-02 07:55:29 |
| massprocesser | process_data | min_fraction:0.5 | 2022-03-02 07:55:29 |
| massprocesser | process_data | fill_peaks:FALSE | 2022-03-02 07:55:29 |
| massdataset | create_mass_dataset() | no:no | 2022-03-02 09:06:33 |
| massprocesser | process_data | path:~/scratch60/CRC RPLC POS | 2022-03-02 12:25:08 |
| massprocesser | process_data | polarity:positive | 2022-03-02 12:25:08 |
| massprocesser | process_data | ppm:20 | 2022-03-02 12:25:08 |
| massprocesser | process_data | peakwidth:5,30 | 2022-03-02 12:25:08 |
| massprocesser | process_data | snthresh:10 | 2022-03-02 12:25:08 |
| massprocesser | process_data | prefilter:3,500 | 2022-03-02 12:25:08 |
| massprocesser | process_data | fitgauss:FALSE | 2022-03-02 12:25:08 |
| massprocesser | process_data | integrate:2 | 2022-03-02 12:25:08 |
| massprocesser | process_data | mzdiff:0.01 | 2022-03-02 12:25:08 |
| massprocesser | process_data | noise:500 | 2022-03-02 12:25:08 |
| massprocesser | process_data | threads:6 | 2022-03-02 12:25:08 |
| massprocesser | process_data | binSize:0.025 | 2022-03-02 12:25:08 |
| massprocesser | process_data | bw:5 | 2022-03-02 12:25:08 |
| massprocesser | process_data | output_tic:FALSE | 2022-03-02 12:25:08 |
| massprocesser | process_data | output_bpc:FALSE | 2022-03-02 12:25:08 |
| massprocesser | process_data | output_rt_correction_plot:FALSE | 2022-03-02 12:25:08 |
| massprocesser | process_data | min_fraction:0.5 | 2022-03-02 12:25:08 |
| massprocesser | process_data | fill_peaks:FALSE | 2022-03-02 12:25:08 |
| massdataset | create_mass_dataset() | no:no | 2022-03-02 14:50:02 |
| massdataset | mutate() | parameter_1:batch=as.character(batch) | 2022-03-05 16:52:56 |
| massdataset | mutate() | parameter_1:batch=as.character(batch) | 2022-03-05 16:53:03 |
| massdataset | mutate() | parameter_1:batch=as.character(batch) | 2022-03-05 16:53:24 |
| massdataset | mutate() | parameter_1:batch=as.character(batch) | 2022-03-05 16:53:35 |
| massdataset | mutate_variable_na_freq() | according_to_samples:QC01,QC02,QC03,QC04,QC05,… | 2022-03-05 17:01:27 |
| massdataset | mutate_variable_na_freq() | according_to_samples:men_normal_166,men_normal_2332,men_normal_2357,men_normal_2371,men_normal_2407,… | 2022-03-05 17:01:27 |
| massdataset | mutate_variable_na_freq() | according_to_samples:menLCCstage1_1122,menLCCstage1_1487,menLCCstage1_1532,menLCCstage1_1941,menLCCstage1_1969,… | 2022-03-05 17:01:27 |
| massdataset | filter() | parameter:~na_freq < 0.2 & (na_freq.1 < 0.5 | na_freq.2 < 0.5) |
2022-03-05 17:01:37 |
| massdataset | mutate_variable_na_freq() | according_to_samples:QC01,QC02,QC03,QC04,QC05,… | 2022-03-05 17:04:03 |
| massdataset | mutate_variable_na_freq() | according_to_samples:men_normal_166,men_normal_2332,men_normal_2357,men_normal_2371,men_normal_2407,… | 2022-03-05 17:04:03 |
| massdataset | mutate_variable_na_freq() | according_to_samples:menLCCstage1_1122,menLCCstage1_1487,menLCCstage1_1532,menLCCstage1_1941,menLCCstage1_1969,… | 2022-03-05 17:04:03 |
| massdataset | filter() | parameter:~na_freq < 0.2 & (na_freq.1 < 0.5 | na_freq.2 < 0.5) |
2022-03-05 17:04:15 |
| massdataset | mutate_variable_na_freq() | according_to_samples:QC01,QC02,QC03,QC04,QC05,… | 2022-03-05 17:06:07 |
| massdataset | mutate_variable_na_freq() | according_to_samples:men_normal_166,men_normal_2332,men_normal_2357,men_normal_2371,men_normal_2407,… | 2022-03-05 17:06:07 |
| massdataset | mutate_variable_na_freq() | according_to_samples:menLCCstage1_1122,menLCCstage1_1487,menLCCstage1_1532,menLCCstage1_1941,menLCCstage1_1969,… | 2022-03-05 17:06:08 |
| massdataset | filter() | parameter:~na_freq < 0.2 & (na_freq.1 < 0.5 | na_freq.2 < 0.5) |
2022-03-05 17:06:16 |
| massdataset | mutate_variable_na_freq() | according_to_samples:QC01,QC02,QC03,QC04,QC05,… | 2022-03-05 17:08:15 |
| massdataset | mutate_variable_na_freq() | according_to_samples:men_normal_166,men_normal_2332,men_normal_2357,men_normal_2371,men_normal_2407,… | 2022-03-05 17:08:15 |
| massdataset | mutate_variable_na_freq() | according_to_samples:menLCCstage1_1122,menLCCstage1_1487,menLCCstage1_1532,menLCCstage1_1941,menLCCstage1_1969,… | 2022-03-05 17:08:15 |
| massdataset | filter() | parameter:~na_freq < 0.2 & (na_freq.1 < 0.5 | na_freq.2 < 0.5) |
2022-03-05 17:08:20 |
| massdataset | mutate() | parameter_1:class=case_when(class == “QC” ~ class, TRUE ~ “Subject”) | 2022-03-05 17:08:57 |
| massdataset | mutate() | parameter_1:class=case_when(class == “QC” ~ class, TRUE ~ “Subject”) | 2022-03-05 17:10:13 |
| massdataset | mutate() | parameter_1:class=case_when(class == “QC” ~ class, TRUE ~ “Subject”) | 2022-03-05 17:18:51 |
| massdataset | mutate() | parameter_1:class=case_when(class == “QC” ~ class, TRUE ~ “Subject”) | 2022-03-05 17:19:31 |
| masscleaner | impute_mv() | method:knn | 2022-03-05 17:45:56 |
| masscleaner | impute_mv() | rowmax:0.5 | 2022-03-05 17:45:56 |
| masscleaner | impute_mv() | colmax:0.9 | 2022-03-05 17:45:56 |
| masscleaner | impute_mv() | maxp:1500 | 2022-03-05 17:45:56 |
| masscleaner | impute_mv() | rng.seed:362436069 | 2022-03-05 17:45:56 |
| masscleaner | impute_mv() | sample_id:men_normal_166,men_normal_2332,men_normal_2357,men_normal_2371,men_normal_2407,… | 2022-03-05 17:45:56 |
| masscleaner | impute_mv() | method:knn | 2022-03-05 17:46:18 |
| masscleaner | impute_mv() | rowmax:0.5 | 2022-03-05 17:46:18 |
| masscleaner | impute_mv() | colmax:0.8 | 2022-03-05 17:46:18 |
| masscleaner | impute_mv() | maxp:1500 | 2022-03-05 17:46:18 |
| masscleaner | impute_mv() | rng.seed:362436069 | 2022-03-05 17:46:18 |
| masscleaner | impute_mv() | sample_id:men_normal_166,men_normal_2332,men_normal_2357,men_normal_2371,men_normal_2407,… | 2022-03-05 17:46:18 |
| masscleaner | impute_mv() | method:knn | 2022-03-05 17:46:40 |
| masscleaner | impute_mv() | rowmax:0.5 | 2022-03-05 17:46:40 |
| masscleaner | impute_mv() | colmax:0.8 | 2022-03-05 17:46:40 |
| masscleaner | impute_mv() | maxp:1500 | 2022-03-05 17:46:40 |
| masscleaner | impute_mv() | rng.seed:362436069 | 2022-03-05 17:46:40 |
| masscleaner | impute_mv() | sample_id:men_normal_166,men_normal_2332,men_normal_2357,men_normal_2371,men_normal_2407,… | 2022-03-05 17:46:40 |
| masscleaner | impute_mv() | method:knn | 2022-03-05 17:46:54 |
| masscleaner | impute_mv() | rowmax:0.5 | 2022-03-05 17:46:54 |
| masscleaner | impute_mv() | colmax:0.8 | 2022-03-05 17:46:54 |
| masscleaner | impute_mv() | maxp:1500 | 2022-03-05 17:46:54 |
| masscleaner | impute_mv() | rng.seed:362436069 | 2022-03-05 17:46:54 |
| masscleaner | impute_mv() | sample_id:menLCCstage1_1122,menLCCstage1_1487,menLCCstage1_1532,menLCCstage1_1941,menLCCstage1_1969,… | 2022-03-05 17:46:54 |
| masscleaner | normalize_data() | method:svr | 2022-03-05 19:18:27 |
| masscleaner | normalize_data() | keep_scale:TRUE | 2022-03-05 19:18:27 |
| masscleaner | normalize_data() | multiple:1 | 2022-03-05 19:18:27 |
| masscleaner | normalize_data() | threads:4 | 2022-03-05 19:18:27 |
| masscleaner | normalize_data() | method:svr | 2022-03-05 19:56:37 |
| masscleaner | normalize_data() | keep_scale:TRUE | 2022-03-05 19:56:37 |
| masscleaner | normalize_data() | multiple:1 | 2022-03-05 19:56:37 |
| masscleaner | normalize_data() | threads:4 | 2022-03-05 19:56:37 |
| masscleaner | normalize_data() | method:svr | 2022-03-05 20:54:20 |
| masscleaner | normalize_data() | keep_scale:TRUE | 2022-03-05 20:54:20 |
| masscleaner | normalize_data() | multiple:1 | 2022-03-05 20:54:20 |
| masscleaner | normalize_data() | threads:4 | 2022-03-05 20:54:20 |
| masscleaner | normalize_data() | method:svr | 2022-03-05 21:06:01 |
| masscleaner | normalize_data() | keep_scale:TRUE | 2022-03-05 21:06:01 |
| masscleaner | normalize_data() | multiple:1 | 2022-03-05 21:06:01 |
| masscleaner | normalize_data() | threads:4 | 2022-03-05 21:06:01 |
| metid | annotate_metabolites_mass_dataset() | ms1.match.ppm:15 | 2022-03-05 23:36:53 |
| metid | annotate_metabolites_mass_dataset() | ms2.match.ppm:30 | 2022-03-05 23:36:53 |
| metid | annotate_metabolites_mass_dataset() | mz.ppm.thr:400 | 2022-03-05 23:36:53 |
| metid | annotate_metabolites_mass_dataset() | ms2.match.tol:0.5 | 2022-03-05 23:36:53 |
| metid | annotate_metabolites_mass_dataset() | fraction.weight:0.3 | 2022-03-05 23:36:53 |
| metid | annotate_metabolites_mass_dataset() | dp.forward.weight:0.6 | 2022-03-05 23:36:53 |
| metid | annotate_metabolites_mass_dataset() | dp.reverse.weight:0.1 | 2022-03-05 23:36:53 |
| metid | annotate_metabolites_mass_dataset() | rt.match.tol:30 | 2022-03-05 23:36:53 |
| metid | annotate_metabolites_mass_dataset() | polarity:positive | 2022-03-05 23:36:53 |
| metid | annotate_metabolites_mass_dataset() | ce:all | 2022-03-05 23:36:53 |
| metid | annotate_metabolites_mass_dataset() | column:rp | 2022-03-05 23:36:53 |
| metid | annotate_metabolites_mass_dataset() | ms1.match.weight:0.25 | 2022-03-05 23:36:53 |
| metid | annotate_metabolites_mass_dataset() | rt.match.weight:0.25 | 2022-03-05 23:36:53 |
| metid | annotate_metabolites_mass_dataset() | ms2.match.weight:0.5 | 2022-03-05 23:36:53 |
| metid | annotate_metabolites_mass_dataset() | total.score.tol:0.5 | 2022-03-05 23:36:53 |
| metid | annotate_metabolites_mass_dataset() | candidate.num:3 | 2022-03-05 23:36:53 |
| metid | annotate_metabolites_mass_dataset() | database:Michael Snyder lab_0.0.1 | 2022-03-05 23:36:53 |
| metid | annotate_metabolites_mass_dataset() | threads:3 | 2022-03-05 23:36:53 |
| metid | annotate_metabolites_mass_dataset() | ms1.match.ppm:15 | 2022-03-06 00:13:48 |
| metid | annotate_metabolites_mass_dataset() | ms2.match.ppm:30 | 2022-03-06 00:13:48 |
| metid | annotate_metabolites_mass_dataset() | mz.ppm.thr:400 | 2022-03-06 00:13:48 |
| metid | annotate_metabolites_mass_dataset() | ms2.match.tol:0.5 | 2022-03-06 00:13:48 |
| metid | annotate_metabolites_mass_dataset() | fraction.weight:0.3 | 2022-03-06 00:13:48 |
| metid | annotate_metabolites_mass_dataset() | dp.forward.weight:0.6 | 2022-03-06 00:13:48 |
| metid | annotate_metabolites_mass_dataset() | dp.reverse.weight:0.1 | 2022-03-06 00:13:48 |
| metid | annotate_metabolites_mass_dataset() | rt.match.tol:1e+06 | 2022-03-06 00:13:48 |
| metid | annotate_metabolites_mass_dataset() | polarity:positive | 2022-03-06 00:13:48 |
| metid | annotate_metabolites_mass_dataset() | ce:all | 2022-03-06 00:13:48 |
| metid | annotate_metabolites_mass_dataset() | column:rp | 2022-03-06 00:13:48 |
| metid | annotate_metabolites_mass_dataset() | ms1.match.weight:0.25 | 2022-03-06 00:13:48 |
| metid | annotate_metabolites_mass_dataset() | rt.match.weight:0.25 | 2022-03-06 00:13:48 |
| metid | annotate_metabolites_mass_dataset() | ms2.match.weight:0.5 | 2022-03-06 00:13:48 |
| metid | annotate_metabolites_mass_dataset() | total.score.tol:0.5 | 2022-03-06 00:13:48 |
| metid | annotate_metabolites_mass_dataset() | candidate.num:3 | 2022-03-06 00:13:48 |
| metid | annotate_metabolites_mass_dataset() | database:MS_0.0.2 | 2022-03-06 00:13:48 |
| metid | annotate_metabolites_mass_dataset() | threads:5 | 2022-03-06 00:13:48 |
| metid | annotate_metabolites_mass_dataset() | ms1.match.ppm:15 | 2022-03-06 00:29:13 |
| metid | annotate_metabolites_mass_dataset() | ms2.match.ppm:30 | 2022-03-06 00:29:13 |
| metid | annotate_metabolites_mass_dataset() | mz.ppm.thr:400 | 2022-03-06 00:29:13 |
| metid | annotate_metabolites_mass_dataset() | ms2.match.tol:0.5 | 2022-03-06 00:29:13 |
| metid | annotate_metabolites_mass_dataset() | fraction.weight:0.3 | 2022-03-06 00:29:13 |
| metid | annotate_metabolites_mass_dataset() | dp.forward.weight:0.6 | 2022-03-06 00:29:13 |
| metid | annotate_metabolites_mass_dataset() | dp.reverse.weight:0.1 | 2022-03-06 00:29:13 |
| metid | annotate_metabolites_mass_dataset() | rt.match.tol:30 | 2022-03-06 00:29:13 |
| metid | annotate_metabolites_mass_dataset() | polarity:negative | 2022-03-06 00:29:13 |
| metid | annotate_metabolites_mass_dataset() | ce:all | 2022-03-06 00:29:13 |
| metid | annotate_metabolites_mass_dataset() | column:rp | 2022-03-06 00:29:13 |
| metid | annotate_metabolites_mass_dataset() | ms1.match.weight:0.25 | 2022-03-06 00:29:13 |
| metid | annotate_metabolites_mass_dataset() | rt.match.weight:0.25 | 2022-03-06 00:29:13 |
| metid | annotate_metabolites_mass_dataset() | ms2.match.weight:0.5 | 2022-03-06 00:29:13 |
| metid | annotate_metabolites_mass_dataset() | total.score.tol:0.5 | 2022-03-06 00:29:13 |
| metid | annotate_metabolites_mass_dataset() | candidate.num:3 | 2022-03-06 00:29:13 |
| metid | annotate_metabolites_mass_dataset() | database:Michael Snyder lab_0.0.1 | 2022-03-06 00:29:13 |
| metid | annotate_metabolites_mass_dataset() | threads:5 | 2022-03-06 00:29:13 |
| metid | annotate_metabolites_mass_dataset() | ms1.match.ppm:15 | 2022-03-06 00:36:58 |
| metid | annotate_metabolites_mass_dataset() | ms2.match.ppm:30 | 2022-03-06 00:36:58 |
| metid | annotate_metabolites_mass_dataset() | mz.ppm.thr:400 | 2022-03-06 00:36:58 |
| metid | annotate_metabolites_mass_dataset() | ms2.match.tol:0.5 | 2022-03-06 00:36:58 |
| metid | annotate_metabolites_mass_dataset() | fraction.weight:0.3 | 2022-03-06 00:36:58 |
| metid | annotate_metabolites_mass_dataset() | dp.forward.weight:0.6 | 2022-03-06 00:36:58 |
| metid | annotate_metabolites_mass_dataset() | dp.reverse.weight:0.1 | 2022-03-06 00:36:58 |
| metid | annotate_metabolites_mass_dataset() | rt.match.tol:1e+06 | 2022-03-06 00:36:58 |
| metid | annotate_metabolites_mass_dataset() | polarity:negative | 2022-03-06 00:36:58 |
| metid | annotate_metabolites_mass_dataset() | ce:all | 2022-03-06 00:36:58 |
| metid | annotate_metabolites_mass_dataset() | column:rp | 2022-03-06 00:36:58 |
| metid | annotate_metabolites_mass_dataset() | ms1.match.weight:0.25 | 2022-03-06 00:36:58 |
| metid | annotate_metabolites_mass_dataset() | rt.match.weight:0.25 | 2022-03-06 00:36:58 |
| metid | annotate_metabolites_mass_dataset() | ms2.match.weight:0.5 | 2022-03-06 00:36:58 |
| metid | annotate_metabolites_mass_dataset() | total.score.tol:0.5 | 2022-03-06 00:36:58 |
| metid | annotate_metabolites_mass_dataset() | candidate.num:3 | 2022-03-06 00:36:58 |
| metid | annotate_metabolites_mass_dataset() | database:MS_0.0.2 | 2022-03-06 00:36:58 |
| metid | annotate_metabolites_mass_dataset() | threads:5 | 2022-03-06 00:36:58 |
| metid | annotate_metabolites_mass_dataset() | ms1.match.ppm:15 | 2022-03-06 00:43:12 |
| metid | annotate_metabolites_mass_dataset() | ms2.match.ppm:30 | 2022-03-06 00:43:12 |
| metid | annotate_metabolites_mass_dataset() | mz.ppm.thr:400 | 2022-03-06 00:43:12 |
| metid | annotate_metabolites_mass_dataset() | ms2.match.tol:0.5 | 2022-03-06 00:43:12 |
| metid | annotate_metabolites_mass_dataset() | fraction.weight:0.3 | 2022-03-06 00:43:12 |
| metid | annotate_metabolites_mass_dataset() | dp.forward.weight:0.6 | 2022-03-06 00:43:12 |
| metid | annotate_metabolites_mass_dataset() | dp.reverse.weight:0.1 | 2022-03-06 00:43:12 |
| metid | annotate_metabolites_mass_dataset() | rt.match.tol:30 | 2022-03-06 00:43:12 |
| metid | annotate_metabolites_mass_dataset() | polarity:positive | 2022-03-06 00:43:12 |
| metid | annotate_metabolites_mass_dataset() | ce:all | 2022-03-06 00:43:12 |
| metid | annotate_metabolites_mass_dataset() | column:rp | 2022-03-06 00:43:12 |
| metid | annotate_metabolites_mass_dataset() | ms1.match.weight:0.25 | 2022-03-06 00:43:12 |
| metid | annotate_metabolites_mass_dataset() | rt.match.weight:0.25 | 2022-03-06 00:43:12 |
| metid | annotate_metabolites_mass_dataset() | ms2.match.weight:0.5 | 2022-03-06 00:43:12 |
| metid | annotate_metabolites_mass_dataset() | total.score.tol:0.5 | 2022-03-06 00:43:12 |
| metid | annotate_metabolites_mass_dataset() | candidate.num:3 | 2022-03-06 00:43:12 |
| metid | annotate_metabolites_mass_dataset() | database:Michael Snyder lab_0.0.1 | 2022-03-06 00:43:12 |
| metid | annotate_metabolites_mass_dataset() | threads:5 | 2022-03-06 00:43:12 |
| metid | annotate_metabolites_mass_dataset() | ms1.match.ppm:15 | 2022-03-06 00:48:51 |
| metid | annotate_metabolites_mass_dataset() | ms2.match.ppm:30 | 2022-03-06 00:48:51 |
| metid | annotate_metabolites_mass_dataset() | mz.ppm.thr:400 | 2022-03-06 00:48:51 |
| metid | annotate_metabolites_mass_dataset() | ms2.match.tol:0.5 | 2022-03-06 00:48:51 |
| metid | annotate_metabolites_mass_dataset() | fraction.weight:0.3 | 2022-03-06 00:48:51 |
| metid | annotate_metabolites_mass_dataset() | dp.forward.weight:0.6 | 2022-03-06 00:48:51 |
| metid | annotate_metabolites_mass_dataset() | dp.reverse.weight:0.1 | 2022-03-06 00:48:51 |
| metid | annotate_metabolites_mass_dataset() | rt.match.tol:1e+06 | 2022-03-06 00:48:51 |
| metid | annotate_metabolites_mass_dataset() | polarity:positive | 2022-03-06 00:48:51 |
| metid | annotate_metabolites_mass_dataset() | ce:all | 2022-03-06 00:48:51 |
| metid | annotate_metabolites_mass_dataset() | column:rp | 2022-03-06 00:48:51 |
| metid | annotate_metabolites_mass_dataset() | ms1.match.weight:0.25 | 2022-03-06 00:48:51 |
| metid | annotate_metabolites_mass_dataset() | rt.match.weight:0.25 | 2022-03-06 00:48:51 |
| metid | annotate_metabolites_mass_dataset() | ms2.match.weight:0.5 | 2022-03-06 00:48:51 |
| metid | annotate_metabolites_mass_dataset() | total.score.tol:0.5 | 2022-03-06 00:48:51 |
| metid | annotate_metabolites_mass_dataset() | candidate.num:3 | 2022-03-06 00:48:51 |
| metid | annotate_metabolites_mass_dataset() | database:MS_0.0.2 | 2022-03-06 00:48:51 |
| metid | annotate_metabolites_mass_dataset() | threads:5 | 2022-03-06 00:48:51 |
| metid | annotate_metabolites_mass_dataset() | ms1.match.ppm:15 | 2022-03-06 00:58:51 |
| metid | annotate_metabolites_mass_dataset() | ms2.match.ppm:30 | 2022-03-06 00:58:51 |
| metid | annotate_metabolites_mass_dataset() | mz.ppm.thr:400 | 2022-03-06 00:58:51 |
| metid | annotate_metabolites_mass_dataset() | ms2.match.tol:0.5 | 2022-03-06 00:58:51 |
| metid | annotate_metabolites_mass_dataset() | fraction.weight:0.3 | 2022-03-06 00:58:51 |
| metid | annotate_metabolites_mass_dataset() | dp.forward.weight:0.6 | 2022-03-06 00:58:51 |
| metid | annotate_metabolites_mass_dataset() | dp.reverse.weight:0.1 | 2022-03-06 00:58:51 |
| metid | annotate_metabolites_mass_dataset() | rt.match.tol:30 | 2022-03-06 00:58:51 |
| metid | annotate_metabolites_mass_dataset() | polarity:negative | 2022-03-06 00:58:51 |
| metid | annotate_metabolites_mass_dataset() | ce:all | 2022-03-06 00:58:51 |
| metid | annotate_metabolites_mass_dataset() | column:rp | 2022-03-06 00:58:51 |
| metid | annotate_metabolites_mass_dataset() | ms1.match.weight:0.25 | 2022-03-06 00:58:51 |
| metid | annotate_metabolites_mass_dataset() | rt.match.weight:0.25 | 2022-03-06 00:58:51 |
| metid | annotate_metabolites_mass_dataset() | ms2.match.weight:0.5 | 2022-03-06 00:58:51 |
| metid | annotate_metabolites_mass_dataset() | total.score.tol:0.5 | 2022-03-06 00:58:51 |
| metid | annotate_metabolites_mass_dataset() | candidate.num:3 | 2022-03-06 00:58:51 |
| metid | annotate_metabolites_mass_dataset() | database:Michael Snyder lab_0.0.1 | 2022-03-06 00:58:51 |
| metid | annotate_metabolites_mass_dataset() | threads:5 | 2022-03-06 00:58:51 |
| metid | annotate_metabolites_mass_dataset() | ms1.match.ppm:15 | 2022-03-06 01:14:54 |
| metid | annotate_metabolites_mass_dataset() | ms2.match.ppm:30 | 2022-03-06 01:14:54 |
| metid | annotate_metabolites_mass_dataset() | mz.ppm.thr:400 | 2022-03-06 01:14:54 |
| metid | annotate_metabolites_mass_dataset() | ms2.match.tol:0.5 | 2022-03-06 01:14:54 |
| metid | annotate_metabolites_mass_dataset() | fraction.weight:0.3 | 2022-03-06 01:14:54 |
| metid | annotate_metabolites_mass_dataset() | dp.forward.weight:0.6 | 2022-03-06 01:14:54 |
| metid | annotate_metabolites_mass_dataset() | dp.reverse.weight:0.1 | 2022-03-06 01:14:54 |
| metid | annotate_metabolites_mass_dataset() | rt.match.tol:1e+06 | 2022-03-06 01:14:54 |
| metid | annotate_metabolites_mass_dataset() | polarity:negative | 2022-03-06 01:14:54 |
| metid | annotate_metabolites_mass_dataset() | ce:all | 2022-03-06 01:14:54 |
| metid | annotate_metabolites_mass_dataset() | column:rp | 2022-03-06 01:14:54 |
| metid | annotate_metabolites_mass_dataset() | ms1.match.weight:0.25 | 2022-03-06 01:14:54 |
| metid | annotate_metabolites_mass_dataset() | rt.match.weight:0.25 | 2022-03-06 01:14:54 |
| metid | annotate_metabolites_mass_dataset() | ms2.match.weight:0.5 | 2022-03-06 01:14:54 |
| metid | annotate_metabolites_mass_dataset() | total.score.tol:0.5 | 2022-03-06 01:14:54 |
| metid | annotate_metabolites_mass_dataset() | candidate.num:3 | 2022-03-06 01:14:54 |
| metid | annotate_metabolites_mass_dataset() | database:MS_0.0.2 | 2022-03-06 01:14:54 |
| metid | annotate_metabolites_mass_dataset() | threads:5 | 2022-03-06 01:14:54 |
| massdataset | filter() | parameter:~!is.na(Level) |
2022-03-06 01:16:20 |
| massdataset | filter() | parameter:~Level == 1 | Level == 2 |
2022-03-06 01:16:20 |
| massdataset | filter() | parameter:~!is.na(Level) |
2022-03-06 01:16:23 |
| massdataset | filter() | parameter:~Level == 1 | Level == 2 |
2022-03-06 01:16:23 |
| massdataset | filter() | parameter:~!is.na(Level) |
2022-03-06 01:16:25 |
| massdataset | filter() | parameter:~Level == 1 | Level == 2 |
2022-03-06 01:16:25 |
| massdataset | filter() | parameter:~!is.na(Level) |
2022-03-06 01:16:27 |
| massdataset | filter() | parameter:~Level == 1 | Level == 2 |
2022-03-06 01:16:27 |
| massdataset | merge_mass_dataset | sample_direction:inner | 2022-03-06 01:19:43 |
| massdataset | merge_mass_dataset | variable_direction:full | 2022-03-06 01:19:43 |
| massdataset | merge_mass_dataset | sample_by:sample_id | 2022-03-06 01:19:43 |
| massdataset | merge_mass_dataset | variable_by:variable_id,mz,rt | 2022-03-06 01:19:43 |
| massdataset | merge_mass_dataset | sample_direction:inner | 2022-03-06 01:20:04 |
| massdataset | merge_mass_dataset | variable_direction:full | 2022-03-06 01:20:04 |
| massdataset | merge_mass_dataset | sample_by:sample_id | 2022-03-06 01:20:04 |
| massdataset | merge_mass_dataset | variable_by:variable_id,mz,rt | 2022-03-06 01:20:04 |
| massdataset | merge_mass_dataset | sample_direction:inner | 2022-03-06 01:24:10 |
| massdataset | merge_mass_dataset | variable_direction:full | 2022-03-06 01:24:10 |
| massdataset | merge_mass_dataset | sample_by:sample_id | 2022-03-06 01:24:10 |
| massdataset | merge_mass_dataset | variable_by:variable_id,mz,rt | 2022-03-06 01:24:10 |
| massdataset | filter() | parameter:~Level == min(Level) |
2022-03-06 01:25:50 |
| massdataset | filter() | parameter:~Total.score == max(Total.score) |
2022-03-06 01:25:50 |
| massdataset | slice_head() | n:1 | 2022-03-06 01:25:50 |
| massdataset | slice_head() | prop:missing | 2022-03-06 01:25:50 |